Okazaki, Kei-ichi: шукати на сайті Z-Library

Hummer, Gerhard, Kaila, Ville R.I., Zhu, Fangqiang, Okazaki, Kei-ichi, Wikström, Mårten

Рік:

2009

Мова:

english

Файл:

PDF, 83 KB

english, 2009

Water Mediated Membrane Transport: From Channels to Proton Pumps

Журнал:

Journal of Chemical Theory and Computation

Рік:

2013

Мова:

english

Файл:

PDF, 37 KB

english, 2013

CafeMol: A Coarse-Grained Biomolecular Simulator for Simulating Proteins at Work

Kenzaki, Hiroo, Koga, Nobuyasu, Hori, Naoto, Kanada, Ryo, Li, Wenfei, Okazaki, Kei-ichi, Yao, Xin-Qiu, Takada, Shoji

Журнал:

Рік:

2011

Мова:

english

Файл:

PDF, 1.98 MB

english, 2011

Biomolecular Coarse-Grained Simulation Program CafeMol

Kenzaki, Hiroo, Koga, Nobuyasu, Fujiwara, Shinji, Hori, Naoto, Kanada, Ryo, Okazaki, Kei-ichi, Yao, Xin-Qiu, Li, Wenfei, Takada, Shoji

Журнал:

Okazaki, Kei-ichi, Takano, Mitsunori

Рік:

2010

Мова:

english

Файл:

PDF, 34 KB

english, 2010

Application of an Inter-Protein Coarse-Grained Force Field to Binding Process of Actomyosin

Журнал:

Рік:

2010

Мова:

english

Файл:

PDF, 82 KB

english, 2010

Exploring an Intermediate State of F1-ATPase by Atomistic Molecular Dynamics Simulation

Журнал:

Warnau, Judith, Okazaki, Kei-ichi, Hummer, Gerhard

Рік:

2013

Мова:

english

Файл:

PDF, 37 KB

english, 2013

Computational studies of ion binding in cation/proton antiporters

Журнал:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Рік:

2014

Мова:

english

Файл:

PDF, 48 KB

english, 2014

Temperature-Enhanced Association of Proteins Due to Electrostatic Interaction: A Coarse-Grained Simulation of Actin–Myosin Binding

Okazaki, Kei-ichi, Sato, Takato, Takano, Mitsunori

Журнал:

Journal of the American Chemical Society

Рік:

2012

Мова:

english

Файл:

PDF, 2.04 MB

english, 2012

Chemical conversion of lycotonine into an aconitine alkaloid, 7-deoxylycoctonine

Takayama, Hiromitsu, Yamaguchi, Kei-ichi, Okazaki, Toshio, Aimi, Norio, Sakai, Shin-ichiro

Журнал:

Journal of the Chemical Society Chemical Communications

Рік:

1987

Мова:

english

Файл:

PDF, 201 KB

english, 1987

Elasticity, friction, and pathway of γ-subunit rotation in F o F 1 -ATP synthase

Proceedings of the National Academy of Sciences

Журнал:

Рік:

2015

Мова:

english

Файл:

PDF, 1.66 MB

english, 2015

F 1 -ATPase conformational cycle from simultaneous single-molecule FRET and rotation measurements

Sugawa, Mitsuhiro, Okazaki, Kei-ichi, Kobayashi, Masaru, Matsui, Takashi, Hummer, Gerhard, Masaike, Tomoko, Nishizaka, Takayuki

Журнал:

Proceedings of the National Academy of Sciences

Рік:

2016

Мова:

english

Файл:

PDF, 1.79 MB

english, 2016

Multiscale analysis of functional motions in F1-ATPase: From Pi release to elasticity and friction of γ-subunit rotation

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Журнал:

Рік:

2014

Мова:

english

Файл:

PDF, 52 KB

english, 2014

Multiscale Analysis of Functional Motions in F1-ATPase: From Pi Release to Elasticity and Friction of γ-Subunit Rotation

Журнал:

CHEMICAL & PHARMACEUTICAL BULLETIN

Рік:

2015

Мова:

english

Файл:

PDF, 42 KB

english, 2015

A sensitive spectrofluorimetric method for the determination of human serum albumin with chrome-azurol S.

SAITO, YUTAKA, OKAZAKI(INDEN), YUKIKO, YANO(WADA), SHOKO, KANETSUNA, ATSUKO, OKUDA, HIDEKI, MIYAZAKI, KEI-ICHI, MIFUNE, MASAKI, ODO, JUNICHI, TANAKA, YOSHIMASA

Журнал:

Рік:

1986

Файл:

PDF, 529 KB

1986

Conformational Transition from Catalytic Dwell to ATP-Binding Dwell in F 1 -ATPase

Okazaki, Kei-ichi, Sugawa, Mitsuhiro, Hummer, Gerhard

Журнал:

Рік:

2017

Мова:

english

Файл:

PDF, 43 KB

english, 2017

1P589 Coupling between protein conformational change and ligand binding reaction studied by multiple-basin energy landscape model(27. Molecular dynamics simulation,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Журнал:

Рік:

2006

Мова:

english

Файл:

PDF, 157 KB

english, 2006

2P145 Mechanical principle of the motor protein KIF1A studied by molecular dynamics simulation(Molecular motors,Poster Presentations)

Kuwata, Takeshi, Okazaki, Kei-ichi, Tatsumi, Rie, Koga, Nobuyasu, Takada, Shoji

Журнал:

Рік:

2007

Файл:

PDF, 229 KB

2007

3P074 Coupled protein conformational change and ligand-binding affinity revealed by coarse-grained simulations : application to molecular motors(Proteins-stability, folding, and other physicochemical properties,Oral Presentations)

Журнал:

Рік:

2007

Мова:

english

Файл:

PDF, 168 KB

english, 2007

2P-199 Mechanical principle of the motor protein KIF1A studied by molecular dynamics simulation (2)(The 46th Annual Meeting of the Biophysical Society of Japan)

Kuwata, Takeshi, Okazaki, Kei-ichi, Kanada, Ryo, Kenzaki, Hiroo, Takada, Shoji

Журнал:

Okazaki, Kei-ichi, Takano, Mitsunori

Рік:

2008

Мова:

english

Файл:

PDF, 285 KB

english, 2008

2P-120 Application of an inter-protein coarse-grained force field to binding process of actomyosin(Molecular motor,The 47th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Kanada, Ryo, Okazaki, Kei-ichi, Kenzaki, Hiroo, Takada, Shoji

Рік:

2009

Мова:

english

Файл:

PDF, 241 KB

english, 2009

1TA4-02 Mechanism of unidirectional move of KIF1A motor studied by coarse-grained simulations(The 47th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Sato, Takato, Ohnuki, Jun, Okazaki, Kei-ichi, Takano, Mitsunori

Рік:

2009

Мова:

english

Файл:

PDF, 234 KB

english, 2009

3P042 Atomic-level observation of how ATP-binding influences the structural and solvation state of myosin(Protein: Structure & Function,The 48th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Ohnuki, Jun, Sato, Takato, Okazaki, Kei-ichi, Takano, Mitsunori

Рік:

2010

Мова:

english

Файл:

PDF, 239 KB

english, 2010

3P161 Are the actin-biding cleft closure and the lever-arm swing of myosin thermodynamically-favored structural changes?(Molecular motor,The 48th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Рік:

2010

Мова:

english

Файл:

PDF, 238 KB

english, 2010

1P-129 Mechanism of unidirectional move of KIF1A motor studied by coarse-grained simulations(Molecular motor, The 47th Annual Meeting of the Biophysical Society of Japan)

Kanada, Ryo, Kuwata, Takeshi, Okazaki, Kei-ichi, Kenzaki, Hiroo, Takada, Shoji

Журнал:

Рік:

2009

Мова:

english

Файл:

PDF, 214 KB

english, 2009

1P147 Multiscale analysis of functional motions in F1-ATPase : From Pi release to elasticity and friction of γ-subunit rotation(11. Molecular motor,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Журнал:

Kanada, Ryo, Okazaki, Kei-ichi, Takada, Shoji

Рік:

2014

Мова:

english

Файл:

PDF, 694 KB

english, 2014

1P-145 Simulation study on stepping mechanism of Conventional Kinesin by coarse-grained model(The 46th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Рік:

2008

Мова:

english

Файл:

PDF, 284 KB

english, 2008

3P163 Structural comparison of F_1-ATPase : Coupling among enzyme structures, reaction sites, and rotations(Molecular motor,The 48th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Рік:

2010

Мова:

english

Файл:

PDF, 238 KB

english, 2010

Multiscale Analysis of Functional Motions in F1-ATPase: From Pi Release to Elasticity and Friction of γ-subunit Rotation

OKAZAKI, Kei-ichi

Журнал:

Рік:

2015

Файл:

PDF, 821 KB

2015

2P-159 Coarse-grained simulation for understanding working mechanism of F_1-ATPase(The 46th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Рік:

2008

Мова:

english

Файл:

PDF, 287 KB

english, 2008

2S4-4 Structure change coupled with binding and its application to biomolecular systems(2S4 What protein tertiary structure tells us,The 46th Annual Meeting of the Biophysical Society of Japan)

Журнал:

Nakamura, Akihiko, Okazaki, Kei-ichi, Furuta, Tadaomi, Sakurai, Minoru, Iino, Ryota

Рік:

2008

Мова:

english

Файл:

PDF, 288 KB

english, 2008

Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin

Журнал:

Nature Communications

Рік:

2018

Мова:

english

Файл:

PDF, 2.52 MB

english, 2018

Mechanism of the electroneutral sodium/proton antiporter PaNhaP from transition-path shooting

Okazaki, Kei-ichi, Wöhlert, David, Warnau, Judith, Jung, Hendrik, Yildiz, Özkan, Kühlbrandt, Werner, Hummer, Gerhard

Журнал:

Nature Communications

Рік:

2019

Мова:

english

Файл:

PDF, 2.04 MB

english, 2019

Processive Chitinase is Burnt-Bridge Brownian Motor Operated by Fast Catalysis after Peeling Rail from Crystalline Chitin

Nakamura, Akihiko, Okazaki, Kei-ichi, Furuta, Tadaomi, Sakurai, Minoru, Iino, Ryota

Журнал:

Nakamura, Akihiko, Okazaki, Kei-ichi, Furuta, Tadaomi, Sakurai, Minoru, Iino, Ryota

Рік:

2019

Мова:

english

Файл:

PDF, 50 KB

english, 2019

Processive Chitinase is Burnt-Bridge Brownian Motor Operated by Fast Catalysis after Peeling Rail from Crystalline Chitin

Журнал: